Browse of TCMCG006C35661 protein

CDS

Accession Number	TCMCG006C35661
gbkey	CDS
Protein Id	XP_013750112.1
Location	join(39217938..39218097,39218179..39218390,39218813..39218950,39219064..39219237,39219526..39219622,39219769..39219881,39219962..39220084,39220170..39220241,39220444..39220536,39220816..39220926,39221019..39221141,39221328..39221513,39221597..39221671,39222102..39222238,39222396..39222530,39222631..39222776,39222860..39222925,39223186..39223292,39223375..39223455,39223533..39223607,39223693..39223794,39223948..39224116,39224216..39224361,39224506..39224589,39224663..39224763,39225011..39225164,39225456..39225530,39225639..39225783,39226158..39226812,39227009..39227069,39227152..39227297,39227371..39227554,39227672..39227770,39227972..39228351,39228430..39228606,39228768..39228864,39228955..39229110,39229200..39229430,39229515..39229598,39229706..39229813)
Gene	LOC106452513
GeneID	106452513
Organism	Brassica napus

Protein

Length	1925aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013894658.2
Definition	rRNA biogenesis protein RRP5-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTGGCTCCGTCGAAAAAAGTTGCAAGTGGAAAACGTAATGACTCTACTAAAGTATTCAAGTCATCGAAGAAACCGTTCAAGAAGACGAAGGACGATGTCGCTGCAAGGTCTGAAGCCATGGCTCTCCAGCTCGAAGACGTTCCTGACTTTCCTCGAGGGGGAGGCACTTCTCTGAGCAAAACAGAGCGTAAGAAAATATATGAAGAGGTCGACGCTGAGTTTGAAGCTGAGGAGCGTGTTTCCAAGAGGAGTAAAGGAGGTAAACCTAAGATGAAGAGAAACCCTAGCGAGGTTGACGAATTAGGATCTCTTTTTGACGGTGGTTTAACTGGAAAACGGCCAAGATATGCCAATAAGATTACCATTAAGAATATCTCTCCGGGAATGAAGCTTCTTGGAGTTGTTACTGAAGTAAACCAGAAGGACATAGTAATTAGTCTTCCAGGGGGATTACGTGGACTGGTTCGCGCAAGCGAGGCCTTGGATTTTACGGATTTCGGAACAGAGGACGATGAAAATGAACTCCTTCGAGACATCTTTTCGGTGGGCCAGCTTGTTCCTTGCTTTGTATTGCAGTTAGATGATGATAAGAAGGAGGCGGGCAAAAGGAAAATATGGCTTTCGTTGCGACTTTCTTTGTTGCACAAGGGATTCAGTTTGGATTCCTTTCAGTCGGGAATGGTAGTCACTGCAAGCGTGAAAAGCGTGGAAGATCATGGTTATATCCTTCACTTTGGATTGCCTTCTATCACAGGATTTATCAAAAAAAGCAAAGATGGAAATCAAGAGTTAAAGACTGGGCAACTTATTCAGGGCGTGGTTACAAATATTGATAAAGAACGGAAAATTGTTTCTCTTAGTGCGGACCCAGATTCAGTGGCGAAGTGTGTGACCAAGGATCTTAGTGGTATGTCGTTTGATCTTCTCATACCAGGCATGATGGTTAATGCCCGTGTGCAATCTGTACTTGAGAATGGGATACTGTTAGGATTTCTTATGTACTTTACTGGAACGGTTGATCTATTCCATTTACAAAATCCAATGTGTAACAAGAGCTGGAAGGATGAATATACTCAGACTAAGATGGTCAATGCTAGAATATTGTTTATGGATCCATCAACTAGAGCTGTTGGTTTGACGTTAAACCCACATCTTGTTGGTAACAAGGTTCCTCCTTTGCATGTCTCTAGCGGAGACATATTTGATGAAGCAAAAGTTGTCCGTGTTGATAAATCAGGCCTTCTTCTTGAACTCCCTTCTAAGCCTGTTTCAACTCCAGCATATGTTAGCACTTATGACGCAGCAGAAGATGAAGTAAAGAAACTGGAAAAGAATTTCAAGGAAGGAAACCGCATCCGTGTTCGAATCCTCGGCCTTAAGCATATGGAGGGGTTGGCGATAGGGACTTTAAAGGAAAGTGCTTTTGAAGGGCCAGCTTTCTCCCACTCAGATGTCAAGCCTGGTATGGTGACGAAGGCAAAAATCATATCTGTTGATACATTTGGTGCCATTGTGCAATTTCCGGGTGGTTTGAAAGCAATGTGCCCACTTCAGCATATGTCTGAGTTTGAAGTTACGAAGCCCAGGAAAAAGTTCAAGGTTGGAGCTGAACTAATATTTCGGGTGCTTGGCTGCAAATCAAAGAGAATAACTGTTACATGCAAGAAAACACTTGTCAAGTCTAAACTTCCGATTTTGAGTTCTTACGCTGATGCAACTGAAGGATTAGTGACACATGGCTGGATAACAAAGATTGAAAAGCATGGATGCTTTGTTCGCTTCTATAATGGGGTGCAAGGATTTGTTGCCAGATTTGAACTTGGATTAGAGCCTGGTAGTGATCCCAGTTCAGTGTTTCATGTCGGGGAGGTTGTCAAATGCAGAGTAACCAGTGCTGTTCATGGTACTCGAAGGATCAACCTCAGCTTTATGATAAAACCAACAAGTGTTTCTGAAGACGATTCCATCAAGTTAGGTAGTATTGTATCTGGGGTAATTGATAGTATAACTCCTCAGGCAGTCACTGTCCATGTTAAATCCAAAGGTTTGCTGAAGGGTACAGTTTCTGCTGAACATTTAGCTGATCATCATGACCAAGCAAAACTAATGATATCCCTTCTAAGACCTGGATTTGAGCTTGATAAGCTGCTGATAATAGACATTGACGGCAATAACTTGGCTCTCTCTTCAAAATATTCTCTGATTAAGCTTACTGAAGAGCTTCCTTCGGATATTAGTCAGCTCCAGCCAAACTCAGTGGTTCATGGTTATGTTTGTAACTTGATTGAAAATGGCTGCTTTGTCCGTTTTCTGGGTCGGTTGACTGGTTTCGCCCCTAGAAGCAAGGCAATTGACGATCCCAGGGCAGATCTGTCTGAATCCTTCTTTGTTGGACAATCGGTTCGGGCTAATATAGTTGATATAAATCAAGAAAAAAGCAGGATAACTCTTTCATTGAAACAGTCATCTTGTGCTTCTGTAGATGCTTCTTTTATCCAGGAGTACTTCCTTACGGATGAGAAGATCTCGGACCTGCAGTCATCTGATAATACTGAAAGTGAATGTAGTTGGGTTGAGAAATTCTCTATTGGGAGTTTGGTCAAGGGAACCGTACATGAGCAAAATGACCTTGGTTTGGTGGTGAATTTTGACAATATTGATAACGTGCTTGGTTTTATACCTCAGTATCATTTGGGCGGAGCTACTTTGGAACACGGTTCTGTTGTCGAAGCAGTTGTTCTTGATATATCTAGGGCAGAGAGACTAGTTGATTTGTCTTTGCGGCCTGAGCTCATAAACAACTCAACCAAAGAGGTGTCCAACAACCAGTCCAAAAAGAAACGTAGAAGAGGTATTTCCAAGGAACTTGAAGTCCACCAAAGGGTCAGCGCTGTTGTAGAGATTGTGAAGGAGCAATACCTGATTTTGTCGATTCCAGAACATGGTTACACTATAGGATATGCGTCAATATCAGACTATAACACACAGAAGTTACCAGTGAAACAATTTTCAGCTGGACAAAGTGTTGTTGCGTCTGTGGAGTCTCTGCAAAACTCTTTGACGTCGGGGAGGTTGCTTCTACTTCTTGACTCTGTTTCGGGTATTTCTGATACACCCCATTCGAAGAGGACAAGGAATAAATCCAGTTGTGGGGTTGGTTCTGTTGTCCACGCCGAGATTACTGAAATAAAGCCTTTGGAAGTAAGAGTAAACTTTGGCCAAAGTTTCCGAGGAAGAATCCACATAACGGAGGTGGATGATGTAAGTACAAGTGAAGAACCTTTTTCCAAATTCAGAGTCGGGCAATCAGTGTCTGCAAGGGTTATTGCAAAGCCCTGGCATACTAATATCAAAAAGAGTCTTTGGGAGCTTTCTTCAAAGCCCGCAATACTTAGAGTAGACTCCAGTGAATTGAATGGCATTCAAGTGAGGGAACAACTTGAGTTTGTTAATGGAGAGCGTGTCAGGGGATACGTCTACAAAGTGGATAAAGAATGGGTTTGGCTGACAATATCTCGCAATGTGACGGCCGGCGTATTCATTTTAGACACTGCATGCGACGCTCAAGAACTTGAGGAGTTCGAGAGGCGTTTTCCCATCGGTAAAGCTGTTTCAGGCTATGTTTTGACGTACAATAAAGAGAAGAAAACAGCACAGTTGGTTCAGCGTCCACTACTTGATATCCAGAAAAGCATTGCCAACGGTGGAGGCTGTAAAACGGATAATCTAGACAATAGTATTCCTGGTGATGATGCTACTCTATTCATTCATGAAGGAGACATTCTTGGTGGAAGAATTTCTAAGATACTTCCTGGTGTTGGTGGACTTCGTGTGCAAATAGGTCCTAACGTGTTTGGGAGAGTTCATTTTACTGAAATCAATGATTCATGGGTCTCCAATCCATTAGATGGTTTTCATGAAGGTCAGTTTGTCAAGTGCAAGGTCTTGGAAATCAGCAATTCTAGTAAAGGGACTTTGCAAATTGAATTGTCGTTACGGACATCTCTAGATGGTATGACTTCTGACCAACTCTCAGAAGCTTCAAATAATAATGTCAATATATGCAAACGTTTTGAAAGGATTGAAGATCTTTCTCCTGATATGGCCATCCAGGGTTATGTCAAGAATACGATGTCAAAAGGTTGTTTTATTATGCTTTCAAGGAAACTCGACGCGAAAGTTCTATTGTCAAATTTAAGTGATACTTTTGTCAAGGATCCCGAAAAGGAGTTTCCAGTAGGGAAACTTGTAACTGGCAGGGTGTTAAATGTCGAGTCGTTATCCAAGCGGGTAGAAGTCACTCTGAAGAAAGGAAATGCGGGTGGGCAACCAAAATCTGAATCTTATGATTTGAAGCAATTCCATGTTGGAGACGTGATATCAGGGAGCATCAAACGAGTGGAGCCCTATGGCTTATTCATTACAATAGACAAAACGAGCATGGTTGGATTATGTCATAAATCACAGCTTTCTGATGATCGTATCGAGGATGTACAAGCCAGATATGAGGCTGGGGAAAGTGTCACCGCAAAGATTTTGAAGTTGGACGAGGAAAAGCAACGTATATCGCTTGGGATGAAGAGTTCTTATTTTATGAACGACGATGATGTCAAGGCACAGCCACCTTCTGAAGAAAACGCTAAGGAAGACAGCATGGAATGTGATCCAATCAATGATTTGAAGTCGGGAGTTCTTGCAGCAGTTGGTAATTTCGGGTTCCAGGAAACAGGTTCTGAAAGACAGAGTGGAACTTCTCTGGTTCTTGCCCAAGTTGAATCAAGGGCTTCTATCCCTGCGCTTGAGGTTAACCTTGACGACATTGAGGAAGCGGGATTTGACAATGATCAGAATGAGAAGCTACAGGGAGTCGATAAAGATGAAAAGAGCAAGAGAAGGGAAAAGCAGAAAGACAAAGAAGAAAGAGAGAGAAAAATACAAGCTGCTGAAGGAAGATTGCTGGAGAATCATGCTCCTGAGAGTGCTGATGAATTCGAGAAATTGGTTAGAAGCTCTCCAAATAGCAGCTTTGTCTGGATTAAGTATATGGCGTTCATGCTCAGTTTGGCTGATATTGAGAAAGCCAGGTCCATCGCTGAGAGGGCCTTGAGGACTATAAATATTCGTGAAGAAGATGAGAAGCTAAACATATGGGTTGCTTACTTCAATTTGGAAAATGAACATGGAAGTCCTCCAGAGGAAGCTGTTAAGAAAGTTTTTGAAAGAGCACGTCAATACTGTGACCCAAAGAAAGTTTACCACGCTCTCTTGGGCGTATACGAGAGAACAGAGCAATATAAATTGGCTGATAAGCTGCTTGATGAGATGGTCAAGAAGTTCAAGCAATCTTGCAAGGTTTGGTTAAGAAAAGTACAAAGTCATCTGAAGCAAGACGTGGAAGACATTCAGTCCATCGTGAATCGTGCCTTGCTATGTCTTCCGCGCCATAAGCACATTAAATTCATATCACAGACAGCTATTCTTGAGTTCAAATGCGGAAATGCAGACAGAGGGAGATCACTTTTTGAAGGCGTTCTTAGGGAATACCCAAAGAGAACAGACTTGTGGAGTGTTTATCTTGACCAGGAGATTCGGTTGGGAGAAGTTGATGTGATTAGATCTTTGTTCGAGAGAGCCATTAGCTTGAGTTTGCCTCCTAAGAAGATGAAGTTTCTGTTCAAGAAGTTCTTGGAATATGAGAAATCTGCTGGTGACGAGGAGAGAGTCGAGTACGTGAAGCAAAGGGCAATGGAGTATGCAGACAGTACCTTGGCCTGA

Protein:   MVAPSKKVASGKRNDSTKVFKSSKKPFKKTKDDVAARSEAMALQLEDVPDFPRGGGTSLSKTERKKIYEEVDAEFEAEERVSKRSKGGKPKMKRNPSEVDELGSLFDGGLTGKRPRYANKITIKNISPGMKLLGVVTEVNQKDIVISLPGGLRGLVRASEALDFTDFGTEDDENELLRDIFSVGQLVPCFVLQLDDDKKEAGKRKIWLSLRLSLLHKGFSLDSFQSGMVVTASVKSVEDHGYILHFGLPSITGFIKKSKDGNQELKTGQLIQGVVTNIDKERKIVSLSADPDSVAKCVTKDLSGMSFDLLIPGMMVNARVQSVLENGILLGFLMYFTGTVDLFHLQNPMCNKSWKDEYTQTKMVNARILFMDPSTRAVGLTLNPHLVGNKVPPLHVSSGDIFDEAKVVRVDKSGLLLELPSKPVSTPAYVSTYDAAEDEVKKLEKNFKEGNRIRVRILGLKHMEGLAIGTLKESAFEGPAFSHSDVKPGMVTKAKIISVDTFGAIVQFPGGLKAMCPLQHMSEFEVTKPRKKFKVGAELIFRVLGCKSKRITVTCKKTLVKSKLPILSSYADATEGLVTHGWITKIEKHGCFVRFYNGVQGFVARFELGLEPGSDPSSVFHVGEVVKCRVTSAVHGTRRINLSFMIKPTSVSEDDSIKLGSIVSGVIDSITPQAVTVHVKSKGLLKGTVSAEHLADHHDQAKLMISLLRPGFELDKLLIIDIDGNNLALSSKYSLIKLTEELPSDISQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDDPRADLSESFFVGQSVRANIVDINQEKSRITLSLKQSSCASVDASFIQEYFLTDEKISDLQSSDNTESECSWVEKFSIGSLVKGTVHEQNDLGLVVNFDNIDNVLGFIPQYHLGGATLEHGSVVEAVVLDISRAERLVDLSLRPELINNSTKEVSNNQSKKKRRRGISKELEVHQRVSAVVEIVKEQYLILSIPEHGYTIGYASISDYNTQKLPVKQFSAGQSVVASVESLQNSLTSGRLLLLLDSVSGISDTPHSKRTRNKSSCGVGSVVHAEITEIKPLEVRVNFGQSFRGRIHITEVDDVSTSEEPFSKFRVGQSVSARVIAKPWHTNIKKSLWELSSKPAILRVDSSELNGIQVREQLEFVNGERVRGYVYKVDKEWVWLTISRNVTAGVFILDTACDAQELEEFERRFPIGKAVSGYVLTYNKEKKTAQLVQRPLLDIQKSIANGGGCKTDNLDNSIPGDDATLFIHEGDILGGRISKILPGVGGLRVQIGPNVFGRVHFTEINDSWVSNPLDGFHEGQFVKCKVLEISNSSKGTLQIELSLRTSLDGMTSDQLSEASNNNVNICKRFERIEDLSPDMAIQGYVKNTMSKGCFIMLSRKLDAKVLLSNLSDTFVKDPEKEFPVGKLVTGRVLNVESLSKRVEVTLKKGNAGGQPKSESYDLKQFHVGDVISGSIKRVEPYGLFITIDKTSMVGLCHKSQLSDDRIEDVQARYEAGESVTAKILKLDEEKQRISLGMKSSYFMNDDDVKAQPPSEENAKEDSMECDPINDLKSGVLAAVGNFGFQETGSERQSGTSLVLAQVESRASIPALEVNLDDIEEAGFDNDQNEKLQGVDKDEKSKRREKQKDKEERERKIQAAEGRLLENHAPESADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEDEKLNIWVAYFNLENEHGSPPEEAVKKVFERARQYCDPKKVYHALLGVYERTEQYKLADKLLDEMVKKFKQSCKVWLRKVQSHLKQDVEDIQSIVNRALLCLPRHKHIKFISQTAILEFKCGNADRGRSLFEGVLREYPKRTDLWSVYLDQEIRLGEVDVIRSLFERAISLSLPPKKMKFLFKKFLEYEKSAGDEERVEYVKQRAMEYADSTLA